The following is an examples of searching the METATRYP Coronavirus database with a complete surface glycoprotein sequence from SARS-CoV-2 (NCBI accession YP_009724390.1). The METATRYP search will "digest" the protein sequence into its component tryptic peptides, and then search the database for each peptide. Click the abridged sequence link to try the full protein seach in METATRYP Coronavirus.
The surface glycoprotein from SARS-CoV-2 example: https://www.ncbi.nlm.nih.gov/gene/43740568
Protein | Protein Sequence |
---|---|
surface glycoprotein [ Severe acute respiratory syndrome coronavirus 2 ] | MFVFLV....LHYT |